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Antimicrobial REG3 proteins are overproduced during inflammatory bowel disease perpetuate inflammation by depleting Enterococcus faecium from the microbiota. DL-endopeptidase SagA secreted by Enterococcus faecium activates myeloid NOD2 signaling to produce IL-1 beta, which induces the protective cytokine IL-22 from lymphoid cells
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